Information for 12-AWATTMTATWWAA (Motif 17)

C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G A T C G T A A C G T C G T A A C G T C G T A C G T A A C G T C G A T C G A T
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.875
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.5 +/- 19.7bp
Average Position of motif in Background33.4 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AWATTMTATWWAA---
NANTTATATATAANGN
 C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AWATTMTATWWAA-
NNTAATTATAATNANN
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AWATTMTATWWAA-
NNTAATTATAATTNNN
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AWATTMTATWWAA-
NANTATTATAATTNNN
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AWATTMTATWWAA-------
-----GTATAAAAGGCGGGG
 C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AWATTMTATWWAA-------
-----GTATAAAAGGCGGGG
 C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AWATTMTATWWAA--
NTNAATTTTATTGNATT
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AWATTMTATWWAA--
NNANTTTTATTGGNNN
 A C G T C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PHOX2A/MA0713.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AWATTMTATWWAA
TAATTAAATTA--
 C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AWATTMTATWWAA
TAATTNVATTAN-
 C G T A C G T A C G T A A C G T A C G T G T C A C G A T C G T A A C G T C G T A C G A T C G T A C G T A
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G A C G T