Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-48 | -1.114e+02 | 0.0000 | 70.0 | 14.52% | 619.7 | 1.33% | motif file (matrix) |
svg |
2 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-29 | -6.780e+01 | 0.0000 | 87.0 | 18.05% | 1970.3 | 4.21% | motif file (matrix) |
svg |
3 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-28 | -6.643e+01 | 0.0000 | 124.0 | 25.73% | 3936.9 | 8.42% | motif file (matrix) |
svg |
4 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-27 | -6.423e+01 | 0.0000 | 78.0 | 16.18% | 1665.5 | 3.56% | motif file (matrix) |
svg |
5 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-26 | -6.043e+01 | 0.0000 | 91.0 | 18.88% | 2390.9 | 5.11% | motif file (matrix) |
svg |
6 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-24 | -5.750e+01 | 0.0000 | 122.0 | 25.31% | 4227.1 | 9.04% | motif file (matrix) |
svg |
7 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-24 | -5.730e+01 | 0.0000 | 118.0 | 24.48% | 3998.0 | 8.55% | motif file (matrix) |
svg |
8 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-17 | -4.124e+01 | 0.0000 | 69.0 | 14.32% | 1962.9 | 4.20% | motif file (matrix) |
svg |
9 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-15 | -3.528e+01 | 0.0000 | 61.0 | 12.66% | 1779.6 | 3.81% | motif file (matrix) |
svg |
10 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-15 | -3.498e+01 | 0.0000 | 32.0 | 6.64% | 497.3 | 1.06% | motif file (matrix) |
svg |
11 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-15 | -3.481e+01 | 0.0000 | 70.0 | 14.52% | 2287.6 | 4.89% | motif file (matrix) |
svg |
12 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-14 | -3.412e+01 | 0.0000 | 64.0 | 13.28% | 1987.8 | 4.25% | motif file (matrix) |
svg |
13 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-13 | -3.120e+01 | 0.0000 | 56.0 | 11.62% | 1682.5 | 3.60% | motif file (matrix) |
svg |
14 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-11 | -2.722e+01 | 0.0000 | 191.0 | 39.63% | 11720.5 | 25.06% | motif file (matrix) |
svg |
15 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-10 | -2.359e+01 | 0.0000 | 27.0 | 5.60% | 551.8 | 1.18% | motif file (matrix) |
svg |
16 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.179e+01 | 0.0000 | 59.0 | 12.24% | 2334.4 | 4.99% | motif file (matrix) |
svg |
17 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-8 | -1.872e+01 | 0.0000 | 34.0 | 7.05% | 1046.6 | 2.24% | motif file (matrix) |
svg |
18 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-8 | -1.867e+01 | 0.0000 | 51.0 | 10.58% | 2034.5 | 4.35% | motif file (matrix) |
svg |
19 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-7 | -1.838e+01 | 0.0000 | 85.0 | 17.63% | 4364.1 | 9.33% | motif file (matrix) |
svg |
20 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-7 | -1.784e+01 | 0.0000 | 94.0 | 19.50% | 5082.6 | 10.87% | motif file (matrix) |
svg |
21 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-7 | -1.762e+01 | 0.0000 | 22.0 | 4.56% | 499.8 | 1.07% | motif file (matrix) |
svg |
22 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-7 | -1.726e+01 | 0.0000 | 37.0 | 7.68% | 1280.0 | 2.74% | motif file (matrix) |
svg |
23 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-7 | -1.694e+01 | 0.0000 | 50.0 | 10.37% | 2085.9 | 4.46% | motif file (matrix) |
svg |
24 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-7 | -1.642e+01 | 0.0000 | 39.0 | 8.09% | 1441.8 | 3.08% | motif file (matrix) |
svg |
25 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.618e+01 | 0.0000 | 165.0 | 34.23% | 11048.9 | 23.63% | motif file (matrix) |
svg |
26 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-6 | -1.577e+01 | 0.0000 | 29.0 | 6.02% | 909.7 | 1.95% | motif file (matrix) |
svg |
27 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-6 | -1.490e+01 | 0.0000 | 32.0 | 6.64% | 1117.8 | 2.39% | motif file (matrix) |
svg |
28 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.437e+01 | 0.0000 | 14.0 | 2.90% | 252.7 | 0.54% | motif file (matrix) |
svg |
29 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-5 | -1.370e+01 | 0.0000 | 34.0 | 7.05% | 1301.8 | 2.78% | motif file (matrix) |
svg |
30 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.270e+01 | 0.0000 | 153.0 | 31.74% | 10607.3 | 22.68% | motif file (matrix) |
svg |
31 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.229e+01 | 0.0001 | 21.0 | 4.36% | 637.9 | 1.36% | motif file (matrix) |
svg |
32 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.209e+01 | 0.0001 | 35.0 | 7.26% | 1467.1 | 3.14% | motif file (matrix) |
svg |
33 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-5 | -1.188e+01 | 0.0001 | 21.0 | 4.36% | 655.7 | 1.40% | motif file (matrix) |
svg |
34 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-4 | -1.146e+01 | 0.0001 | 16.0 | 3.32% | 418.5 | 0.89% | motif file (matrix) |
svg |
35 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.120e+01 | 0.0001 | 16.0 | 3.32% | 427.1 | 0.91% | motif file (matrix) |
svg |
36 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.082e+01 | 0.0002 | 35.0 | 7.26% | 1559.5 | 3.33% | motif file (matrix) |
svg |
37 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-4 | -1.059e+01 | 0.0002 | 12.0 | 2.49% | 263.4 | 0.56% | motif file (matrix) |
svg |
38 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-4 | -9.940e+00 | 0.0005 | 22.0 | 4.56% | 807.2 | 1.73% | motif file (matrix) |
svg |
39 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.641e+00 | 0.0006 | 91.0 | 18.88% | 5918.5 | 12.66% | motif file (matrix) |
svg |
40 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -9.615e+00 | 0.0006 | 89.0 | 18.46% | 5759.2 | 12.31% | motif file (matrix) |
svg |
41 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-3 | -9.178e+00 | 0.0009 | 25.0 | 5.19% | 1036.9 | 2.22% | motif file (matrix) |
svg |
42 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -8.262e+00 | 0.0022 | 30.0 | 6.22% | 1434.3 | 3.07% | motif file (matrix) |
svg |
43 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-3 | -8.098e+00 | 0.0026 | 19.0 | 3.94% | 736.7 | 1.58% | motif file (matrix) |
svg |
44 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -7.025e+00 | 0.0074 | 38.0 | 7.88% | 2131.8 | 4.56% | motif file (matrix) |
svg |
45 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -6.995e+00 | 0.0074 | 70.0 | 14.52% | 4651.7 | 9.95% | motif file (matrix) |
svg |
46 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.760e+00 | 0.0092 | 38.0 | 7.88% | 2163.7 | 4.63% | motif file (matrix) |
svg |
47 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -6.475e+00 | 0.0119 | 8.0 | 1.66% | 206.1 | 0.44% | motif file (matrix) |
svg |
48 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.322e+00 | 0.0136 | 54.0 | 11.20% | 3469.7 | 7.42% | motif file (matrix) |
svg |
49 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.808e+00 | 0.0223 | 17.0 | 3.53% | 766.9 | 1.64% | motif file (matrix) |
svg |
50 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.791e+00 | 0.0223 | 12.0 | 2.49% | 453.7 | 0.97% | motif file (matrix) |
svg |
51 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.592e+00 | 0.0266 | 32.0 | 6.64% | 1858.5 | 3.97% | motif file (matrix) |
svg |
52 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -5.557e+00 | 0.0270 | 36.0 | 7.47% | 2168.2 | 4.64% | motif file (matrix) |
svg |
53 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -4.872e+00 | 0.0526 | 20.0 | 4.15% | 1056.7 | 2.26% | motif file (matrix) |
svg |
54 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.858e+00 | 0.0526 | 54.0 | 11.20% | 3732.1 | 7.98% | motif file (matrix) |
svg |
55 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -4.745e+00 | 0.0575 | 74.0 | 15.35% | 5451.0 | 11.66% | motif file (matrix) |
svg |