Information for 12-GCTGAGATCA (Motif 26)

A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.277e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets26.2 +/- 18.7bp
Average Position of motif in Background55.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGATCA-
NGATGACGTCAT
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGATCA-
NRRTGACGTCAT
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGATCA-
NGRTGACGTCAY
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCTGAGATCA-----
AAGGCGAAATCATCGCA
 A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGATCA-
NGATGACGTCAT
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTGAGATCA
GCAGTGATTT
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCTGAGATCA
--TRAGGTCA
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGATCA
TGCTGTGATTT
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTGAGATCA-----
NATGACATCATCNNN
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCTGAGATCA-
NTTGATTNNATCAN
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T