Information for 11-CTCTCAGTCA (Motif 25)

A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A C G T A C T G C G T A A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.366e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets37.0 +/- 24.2bp
Average Position of motif in Background54.0 +/- 42.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CTCTCAGTCA
GSCTGTCACTCA
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTCTCAGTCA-
NCTGTCAATCAN
 A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTCTCAGTCA-
SCTGTCAVTCAV
 A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CTCTCAGTCA-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTCTCAGTCA
---TGAGTCA
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCAGTCA-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCTCAGTCA-
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCTCAGTCA---
--ATGAGTCATCN
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCTCAGTCA---
--NTGAGTCATCN
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCTCAGTCA--
-TGTGACTCATT
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T
A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T