Information for 9-GGAAKGGCCC (Motif 22)

A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G T C A G A G T C A G T C G T A C A C G T A G C T A G T C G T A C
p-value:1e-7
log p-value:-1.617e+01
Information Content per bp:1.809
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif183.9
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets32.8 +/- 26.9bp
Average Position of motif in Background53.1 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAAKGGCCC
GGAAANCCCC
 A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGAAKGGCCC--
GGAGAAAGGTGCGA
 A C G T A C G T A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAAKGGCCC
GGAAATCCCC
 A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAAKGGCCC
TGGGGAAGGGCM-
 A C G T A C G T A C G T A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAAKGGCCC-
GGGAAATCCCCN
 A C G T A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAAKGGCCC
TGGAACAGMA-
 A C G T A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGAAKGGCCC
GGAAATTCCC
 A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAAKGGCCC
TGGAATGT---
 A C G T A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAAKGGCCC
GTTAATGGCC-
 A C G T A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGAAKGGCCC-
-NRRGGGTCTT
 A C T G C T A G C T G A G T C A A C T G A C T G A C T G A G T C A G T C A G T C A C G T
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T