Information for 4-TCAYGGCTCATTA (Motif 5)

A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A
Reverse Opposite:
G C A T C T G A C G T A A C G T A C T G C T G A C T A G A T G C A G T C C T A G C A G T A T C G T G C A
p-value:1e-18
log p-value:-4.335e+01
Information Content per bp:1.683
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 23.6bp
Average Position of motif in Background48.6 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.80
Offset:4
Orientation:forward strand
Alignment:TCAYGGCTCATTA-
----AGCTCATTAT
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TCAYGGCTCATTA-----
-NNNACCTCATTATCNTN
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCAYGGCTCATTA-----
-GCAACCTCATTATNNNN
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

NOTO/MA0710.1/Jaspar

Match Rank:4
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TCAYGGCTCATTA--
-----GCTAATTAGC
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

EMX1/MA0612.1/Jaspar

Match Rank:5
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:TCAYGGCTCATTA--
-----NNTAATTAGN
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.70
Offset:5
Orientation:forward strand
Alignment:TCAYGGCTCATTA--
-----GGTAATTAGC
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:TCAYGGCTCATTA--
-------YCATTAMC
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.70
Offset:5
Orientation:forward strand
Alignment:TCAYGGCTCATTA--
-----GGTAATTAGC
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

HOXA2/MA0900.1/Jaspar

Match Rank:9
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TCAYGGCTCATTA--
-----CCTAATTACC
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TCAYGGCTCATTA
-----NCTAATTA
 A C G T T A G C G T C A G A T C T C A G A T C G A G T C A G C T T G A C C G T A C G A T A G C T C G T A
A C G T A C G T A C G T A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A