Information for 25-TGGGTGGCGT (Motif 39)

A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
p-value:1e-2
log p-value:-6.361e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.5 +/- 21.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGGCGT--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGGCGT---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Klf4/MA0039.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGGTGGCGT
TGGGTGGGGC
 A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGGTGGCGT-
TGGGTGTGGCN
 A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T A C G T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGGGTGGCGT
CGTGGGTGGTCC
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGGTGGCGT
GGGGNGGGGC
 A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGGGTGGCGT-----
---GTGGCGTGACNG
 A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGGTGGCGT-
NTGGGTGTGGCC
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGGCGT----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGGTGGCGT
TGGGTGTGGC
 A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C G T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C