Information for 19-AGTGCCAGGG (Motif 32)

G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.942
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.2 +/- 18.2bp
Average Position of motif in Background37.4 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGTGCCAGGG
-TTGCCAAG-
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGTGCCAGGG
CGTGCCAAG-
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGTGCCAGGG----
--TGTCAGGGGGCG
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGTGCCAGGG
--TGCCAA--
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTGCCAGGG
GGTGCCAAGT
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTGCCAGGG
VBTGWCAGCB
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGTGCCAGGG
-ATGCCAACC
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTGCCAGGG
-ATGCCCACC
 G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCCAGGG
NTGATTGACAGN-
 A C G T A C G T A C G T G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTGCCAGGG----
NNNNTGCCAGTGATTG
 A C G T A C G T G T C A A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G