Information for 18-TCACTGAACA (Motif 31)

A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
Reverse Opposite:
C A G T A T C G A G C T C A G T A T G C C G T A A C T G C G A T A T C G G T C A
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.835
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif62.2
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets58.4 +/- 29.0bp
Average Position of motif in Background51.8 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TCACTGAACA-
TAATTCAATGAAGTG
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCACTGAACA---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCACTGAACA
NAGGTCANTGACCT
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCACTGAACA
NSCACTYVAV-
 A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCACTGAACA
MRSCACTYAA--
 A C G T A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCACTGAACA
ACCACTTAA--
 A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCACTGAACA
AGCCACTCAAG-
 A C G T A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCACTGAACA
AASCACTCAA--
 A C G T A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCACTGAACA-
ATGACTCAGCAD
 A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A A C G T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCACTGAACA
ACCACTTAA--
 A C G T A C G T A T G C C G T A A G T C C G A T A T C G G T C A T C G A A T G C G T C A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T