Information for 16-GAGTGATTCT (Motif 27)

A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A C G T A A C G T T G A C C G T A A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.840
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets56.9 +/- 28.8bp
Average Position of motif in Background47.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAGTGATTCT
CNGTGATTTN
 A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGTGATTCT
-AATAATT--
 A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGTGATTCT-
-ATTGATTYND
 A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGTGATTCT
TTRAGTGSYK--
 A C G T A C G T A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGATTCT
GCAGTGATTT-
 A C G T A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTGATTCT-
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATTCT
TTAAGTGCTT--
 A C G T A C G T A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGATTCT
TGAGTCATTTC
 A C G T A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTGATTCT-
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATTCT
ATGAGTCAT---
 A C G T A C G T A T C G C G T A T A C G C G A T A C T G G T C A A C G T A C G T A T G C A C G T
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T