Information for 20-MACCARAYTACAM (Motif 23)

T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
Reverse Opposite:
C A G T A C G T C T A G A C G T G T C A C T G A A C G T A G C T A C G T C T A G C T A G A C G T A C T G
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.801
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.3 +/- 30.7bp
Average Position of motif in Background57.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-MACCARAYTACAM
TAATCHGATTAC--
 A C G T T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-MACCARAYTACAM
TAATTTAATTA---
 A C G T T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-MACCARAYTACAM
TAATTTAATTA---
 A C G T T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-MACCARAYTACAM
TAATTTAATTA---
 A C G T T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--MACCARAYTACAM
YTAATYNRATTA---
 A C G T A C G T T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--MACCARAYTACAM
NTAATBNAATTA---
 A C G T A C G T T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MACCARAYTACAM-----
--TAAGATTATAATACGG
 T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:MACCARAYTACAM-----
--TATAATTATAATATTC
 T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:MACCARAYTACAM-----
--NNTAATTATAATTNNN
 T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:MACCARAYTACAM
---NAAACCACAG
 T G A C C G T A A G T C G A T C C G T A C T G A C G T A A G C T A C G T C G T A A G T C C G T A G T C A
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G