Information for 17-CAGAACCTGTCCT (Motif 20)

A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T
Reverse Opposite:
C T G A A C T G C T A G C G T A A T G C C G T A C T A G C T A G A G C T A C G T G T A C A G C T A C T G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.0 +/- 24.8bp
Average Position of motif in Background49.5 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGAACCTGTCCT
--NCACCTGTN--
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CAGAACCTGTCCT--
-------TGACCTYA
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CAGAACCTGTCCT---
------CTGTTCCTGG
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CAGAACCTGTCCT-
------GTGACCTT
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGAACCTGTCCT
SNGCACCTGCHS-
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGAACCTGTCCT
-TACACCTGTC--
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAGAACCTGTCCT---
------CTGACCTTTG
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGAACCTGTCCT-
GVACAGNMTGTYCTB
 A C G T A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAGAACCTGTCCT--
-----BNTGDCCTTG
 A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGAACCTGTCCT-
GRACAGWMTGTYCTB
 A C G T A G T C C T G A A C T G G T C A C T G A A G T C A G T C C G A T A T C G C G A T G A T C A G T C A G C T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G