Information for 16-TAATTRGTTTAWT (Motif 19)

C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
Reverse Opposite:
C G T A C G A T C G A T C G T A C G T A G T C A A G T C A G T C G T C A T C G A C G A T C A G T C G T A
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.744
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets38.3 +/- 20.9bp
Average Position of motif in Background50.4 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0092.1_Lhx2/Jaspar

Match Rank:1
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------TAATTRGTTTAWT
NNNNNCTAATTAGTTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAATTRGTTTAWT
TAATTAAATTA--
 C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TAATTRGTTTAWT
NNNTTAATTGGTTTTN-
 A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAATTRGTTTAWT
TAATTAAATTA--
 C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TAATTRGTTTAWT
GNNTTAATTGGTTGTT-
 A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TAATTRGTTTAWT
NNNTTAATTGGTTTTT-
 A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATTRGTTTAWT
TTAATTAG------
 A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAATTRGTTTAWT
NNTAATTAGN-----
 A C G T A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T A C G T A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:9
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TAATTRGTTTAWT
CAAAGCTAATTAGNTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A A C G T A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:10
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TAATTRGTTTAWT
TGCCACTAATTAGTGTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T C A G T C T A G A C T G A C G T G A C T C G A T G C T A C G T A A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A A C G T A C G T