Information for 13-GTCCCTGCCC (Motif 18)

A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C
Reverse Opposite:
C A T G A C T G A C T G G A T C C G T A A C T G C T A G T A C G C G T A A T G C
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.832
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif33.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets59.5 +/- 24.0bp
Average Position of motif in Background46.6 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GTCCCTGCCC---
----CTGCCCGCA
 A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTGCCC-
KGCCCTTCCCCA
 A C G T A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCCCTGCCC
--CCCCCCCC
 A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C
A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCCCTGCCC----
CTATCCCCGCCCTATT
 A C G T A C G T A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T A C G T A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCCCTGCCC-
GCCCCGCCCCC
 A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCCCTGCCC--
GGCCCCGCCCCC
 A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCTGCCC-
NAGGTCANTGACCT
 A C G T A C G T A C G T A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTGCCC---
NAGCCCCGCCCCCN
 A C G T A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCCCTGCCC----
TCGACCCCGCCCCTAT
 A C G T A C G T A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTCCCTGCCC-
-GCCCCGCCCC
 A T C G G C A T A T G C A G T C A G T C A C G T C A T G T G A C A G T C G T A C A C G T
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C