p-value: | 1e-20 |
log p-value: | -4.641e+01 |
Information Content per bp: | 1.659 |
Number of Target Sequences with motif | 28.0 |
Percentage of Target Sequences with motif | 3.39% |
Number of Background Sequences with motif | 134.0 |
Percentage of Background Sequences with motif | 0.29% |
Average Position of motif in Targets | 50.7 +/- 22.5bp |
Average Position of motif in Background | 53.6 +/- 28.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGAAAMTCTGGCAGAA TGGCAGNCTGCCAG-- |
|
|
|
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGAAAMTCTGGCAGAA CTTGGCANNNTGCCAA-- |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TGAAAMTCTGGCAGAA -------TTGCCAAG- |
|
|
|
NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGAAAMTCTGGCAGAA TTGGCATGGTGCCA--- |
|
|
|
NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGAAAMTCTGGCAGAA ------NTTGGCANN- |
|
|
|
PB0195.1_Zbtb3_2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGAAAMTCTGGCAGAA- -CAATCACTGGCAGAAT |
|
|
|
NFIA/MA0670.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGAAAMTCTGGCAGAA -----NNTTGGCANN- |
|
|
|
NFIC/MA0161.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TGAAAMTCTGGCAGAA -------TTGGCA--- |
|
|
|
Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TGAAAMTCTGGCAGAA- -------ATGCCAGACN |
|
|
|
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGAAAMTCTGGCAGAA -----ARNTGACA--- |
|
|
|