Information for 13-GGGAAATTCC (Motif 25)

T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A T G C A C G A T C A G T A G C T A G T C A G T C A T G C
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.731
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.63%
Number of Background Sequences with motif451.6
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets52.1 +/- 25.1bp
Average Position of motif in Background51.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATTCC-
NGGGGATTTCCC
 A C G T T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GGGAAATTCC
GGGAATTTCC
 T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GGGAAATTCC
GGGGATTTCC
 T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GGGAAATTCC
GGGAATTTCC
 T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GGGAAATTCC
GGGGATTTCC
 T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATTCC--
AGGGGAATCCCCT
 A C G T T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATTCC-
GGGGGAATCCCC
 A C G T T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATTCC--
AGGGGAATCCCCT
 A C G T T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGGAAATTCC---
---GCATTCCAGN
 T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGGAAATTCC---
---RCATTCCWGG
 T A C G A C T G C T A G C T G A G T C A G C T A A C G T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G