Information for 5-HTACTTTGGTACA (Motif 6)

G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T G T C A G T A C A G T C C G T A C T G A C T G A A C T G A C G T C G T A C A T G
p-value:1e-13
log p-value:-3.187e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 24.6bp
Average Position of motif in Background48.8 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:1
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------HTACTTTGGTACA
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:HTACTTTGGTACA--
----NTTGATACATT
 G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-HTACTTTGGTACA-
GHWACAWTGTWDCWA
 A C G T G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-HTACTTTGGTACA-
GHTACAWTGTADCHR
 A C G T G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----HTACTTTGGTACA------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:HTACTTTGGTACA-
----CCAGGAACAG
 G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:HTACTTTGGTACA----
CTACTTGGATACGGAAT
 G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:HTACTTTGGTACA--
TACCCTAGTTACCGA
 G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---HTACTTTGGTACA
GGGTTACTANAGGTCA
 A C G T A C G T A C G T G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PB0096.1_Zfp187_1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:HTACTTTGGTACA---
--TTATTAGTACATAN
 G A T C A C G T C G T A A G T C A G C T A G C T G C A T A C T G A C T G A C G T C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A