Information for 3-CTGGCTGGGACAA (Motif 3)

A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C T A G C G A T A G T C A G T C A G T C C G T A A C T G A T G C G T A C C G T A C T A G
p-value:1e-21
log p-value:-4.905e+01
Information Content per bp:1.843
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 23.3bp
Average Position of motif in Background22.4 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGGCTGGGACAA
--TGCTGAGTCA-
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGGACAA
TWGTCTGV-----
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGGCTGGGACAA
CTGTCTGG-----
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGGCTGGGACAA
-HTGCTGAGTCAT
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTGGCTGGGACAA---
------RNAACAATGG
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGGCTGGGACAA
--TGCTGACTCA-
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGGCTGGGACAA-
--TGCTGAGTCATC
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A A C G T
A C G T A C G T G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTGGCTGGGACAA---
------GGAACAAAGR
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGGCTGGGACAA
--NGCTN------
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGGCTGGGACAA
---CCAGGAACAG
 A G T C A C G T A C T G A T C G A G T C A C G T A C T G C T A G C T A G C G T A A G T C C G T A C G T A
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G