Information for 11-CCTTGTCTGG (Motif 21)

A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
Reverse Opposite:
T G A C A G T C C G T A A C T G G T C A A G T C G T C A C T G A C A T G T A C G
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.833
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif229.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets61.3 +/- 21.1bp
Average Position of motif in Background49.2 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CCTTGTCTGG
--CTGTCTGG
 A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CCTTGTCTGG
--TWGTCTGV
 A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGTCTGG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CCTTGTCTGG
VBSYGTCTGG
 A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCTTGTCTGG--
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CCTTGTCTGG---
---GGTCTGGCAT
 A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGTCTGG
NCCTTATCTG-
 A C G T A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTTGTCTGG
NNCTTATCTN-
 A C G T A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGTCTGG
NNACTTGCCTT-
 A C G T A C G T A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTTGTCTGG
YCTTATCTBN
 A T G C G A T C A G C T A C G T A C T G C A G T A G T C C G A T A C T G A C T G
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C