Information for 8-GAGGGCACAATAA (Motif 12)

A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A A G C T A G C T T C A G A C G T A C T G G A T C A T G C A G T C A C G T G T A C
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.1 +/- 26.8bp
Average Position of motif in Background56.4 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCACAATAA
ARGAGGMCAAAATGW
 A C G T A C G T A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCACAATAA-
CGAAGCACACAAAATA
 A C G T A C G T A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAGGGCACAATAA-
-----GACAATGNN
 A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCACAATAA---
TCACGGAACAATAGGTG
 A C G T A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCACAATAA
TRAGGTCA------
 A C G T A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGGGCACAATAA---
-CTCACACAATGGCGC
 A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGGCACAATAA
AAGGTCAC-----
 A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGGCACAATAA---
TTTAGAACAATAAAAT
 A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGGCACAATAA---
-ATGTCACAACAACAC
 A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCACAATAA
NGTGGGCAT-----
 A C G T A C T G C G T A A C T G A T C G C T A G A G T C C G T A A G T C C T G A C T G A A C G T C G T A C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T