Information for 4-AGAKTACTTTGTVASC (Motif 8)

C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
Reverse Opposite:
A T C G T A G C A G C T A G C T C G T A A T G C C G T A C G T A G C T A A C T G A C G T G C T A G T A C A C G T G T A C C G A T
p-value:1e-15
log p-value:-3.684e+01
Information Content per bp:1.720
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 19.0bp
Average Position of motif in Background44.4 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAKTACTTTGTVASC
AGGVNCCTTTGT----
 C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AGAKTACTTTGTVASC
------CTTTGT----
 C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGAKTACTTTGTVASC
NWTGATTRGRTTAWN---
 A C G T A C G T C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGAKTACTTTGTVASC--
--ANTCCTTTGTCTNNNN
 C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGAKTACTTTGTVASC
NTGATTAAATTAN----
 A C G T C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAKTACTTTGTVASC
TGATTAAATTA-----
 C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGAKTACTTTGTVASC
ACTCCAAGTACTTGGAA---
 A C G T A C G T A C G T A C G T C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGAKTACTTTGTVASC
NATTTAAGTACTTANNA---
 A C G T A C G T A C G T A C G T C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAKTACTTTGTVASC
TWGHWACAWTGTWDC-
 C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGAKTACTTTGTVASC
-----CCWTTGTYYB-
 C G T A C A T G C G T A A C T G C A G T G T C A G T A C C G A T C G A T A C G T A T C G C G A T T C G A C T G A A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T