Information for 4-CTKWGMACACAAT (Motif 6)

T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T
Reverse Opposite:
G C T A C G A T C A G T A T C G A C G T A C T G C G A T C A G T T A G C G C T A T G A C C G T A A T C G
p-value:1e-18
log p-value:-4.198e+01
Information Content per bp:1.667
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif175.8
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets40.8 +/- 23.2bp
Average Position of motif in Background49.5 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CTKWGMACACAAT
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTKWGMACACAAT--
ATTTGCATACAATGG
 T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTKWGMACACAAT-----
---CTCACACAATGGCGC
 T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTKWGMACACAAT---
CGAAGCACACAAAATA
 T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTKWGMACACAAT
----GTAAACAAT
 T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T
A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTKWGMACACAAT-
TACATGTGCACATAAAA
 A C G T A C G T A C G T T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTKWGMACACAAT
NCTAAGTAAACA--
 A C G T T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTKWGMACACAAT-----
-TCACGGAACAATAGGTG
 T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTKWGMACACAAT----
-NNTNANAACAATTNNA
 T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CTKWGMACACAAT---
-------GACAATGNN
 T A G C C G A T A C T G C G A T A T C G G T C A C G T A T G A C C G T A T A G C G C T A G C T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G