Information for 4-NWAAGAACAA (Motif 4)

G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A
Reverse Opposite:
C G A T C A G T C A T G C G A T G C A T G T A C G A C T A C G T C G T A C A T G
p-value:1e-20
log p-value:-4.660e+01
Information Content per bp:1.475
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.87%
Number of Background Sequences with motif1602.9
Percentage of Background Sequences with motif3.45%
Average Position of motif in Targets47.4 +/- 28.0bp
Average Position of motif in Background51.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-NWAAGAACAA----
AAAAATAACAAACGG
 A C G T G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-NWAAGAACAA---
NTTNAGAACAATTA
 A C G T G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:NWAAGAACAA------
TTAAGAACAATAAATT
 G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:NWAAGAACAA
--AAGGTCAC
 G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:NWAAGAACAA------
TTTAGAACAATAAAAT
 G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:NWAAGAACAA-------
TNNAGAACAATANATNN
 G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:NWAAGAACAA-------
ATAAGAACAAAGGACTA
 G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:NWAAGAACAA---
---RNAACAATGG
 G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-NWAAGAACAA-----
NNTNANAACAATTNNA
 A C G T G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--NWAAGAACAA---
AACAAACAACAAGAG
 A C G T A C G T G T A C G C A T T G C A C T G A C A T G C G T A G C T A G T A C G T C A G C T A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G