Information for 13-CTCCAGGAGG (Motif 25)

G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G
Reverse Opposite:
A T G C A G T C C A G T A G T C G A T C A C G T A T C G A T C G C G T A C A T G
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.835
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif413.6
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets54.2 +/- 22.9bp
Average Position of motif in Background47.1 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGGAGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTCCAGGAGG
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T A C G T G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCCAGGAGG-----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGGAGG
GGCTCYAKCAYC
 A C G T A C G T G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCCAGGAGG-
-ANCAGGATGT
 G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G A C G T
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCAGGAGG
TTCCNGGAAG
 G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCCAGGAGG--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCCAGGAGG--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCAGGAGG-
-NNCAGGTGNN
 G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCAGGAGG-
-AACAGGTGNT
 G T A C G C A T A T G C A T G C T G C A C T A G T C A G G T C A A C T G A T C G A C G T
A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T