Information for 5-CCGGATGCCC (Motif 9)

A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C T G A A C G T A G T C G T A C A C T G A C T G
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.948
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif33.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.6 +/- 29.8bp
Average Position of motif in Background45.3 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------CCGGATGCCC
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

ETV5/MA0765.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCGGATGCCC
ACCGGAAGTG-
 A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCGGATGCCC
ACCCGGATGTA-
 A C G T A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CCGGATGCCC---
----ATGCCCACC
 A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCGGATGCCC------
GGGTGTGCCCAAAAGG
 A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ETV1/MA0761.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCGGATGCCC
ACCGGAAGTA-
 A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T G A A C G T

ETV4/MA0764.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCGGATGCCC
ACCGGAAGTA-
 A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
C T G A T A G C T G A C A T C G A C T G C T G A G C T A T C A G A G C T C T G A A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCGGATGCCC
ANCAGGATGT--
 A C G T A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCGGATGCCC
RCCGGAARYN-
 A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T

FEV/MA0156.2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGGATGCCC
ACCGGAAGTG-
 A C G T A G T C A G T C A C T G A C T G C G T A A G C T A C T G A G T C A G T C A G T C
C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G A C G T