Information for 2-TGTGACCTGG (Motif 3)

C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A A C T G C T A G A G C T A G T C G T C A A T G C G T C A
p-value:1e-14
log p-value:-3.342e+01
Information Content per bp:1.857
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif9.43%
Number of Background Sequences with motif222.8
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets55.6 +/- 23.2bp
Average Position of motif in Background49.0 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGTGACCTGG
-GTGACCTT-
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TGTGACCTGG-
-NTGACCTTGA
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTGG--
--TGACCTTGAT
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTGG
--TGACCT--
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTGG
--TGACCTYA
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TGTGACCTGG--
--TGACCTTGAV
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGTGACCTGG-
NATGACCTTGA
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGTGACCTGG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TGTGACCTGG-
-ATGACCTTGA
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTGACCTGG
BNTGDCCTTG
 C A G T A T C G C A G T A C T G C T G A A G T C A G T C A C G T A C T G A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G