Information for 7-GTTAAGTTGA (Motif 9)

A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A
Reverse Opposite:
A G C T A G T C C T G A C G T A A T G C A C G T A C G T C G T A C G T A A G T C
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.852
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif27.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets38.0 +/- 23.9bp
Average Position of motif in Background50.9 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTAAGTTGA----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTAAGTTGA----
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTTAAGTTGA-
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTAAGTTGA---
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTTAAGTTGA
-TTAAGTGGN
 A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTTAAGTTGA
-TTAAGTGGT
 A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTTAAGTTGA--
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTTAAGTTGA
-TTAATTG--
 A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A
A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTTAAGTTGA---
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTAAGTTGA
NTCAAGTGGN
 A C T G C G A T C G A T C G T A C G T A A T C G G C A T A G C T C T A G C T G A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T