Information for 5-YTGCMSAGAGAGMMCA (Motif 6)

A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
Reverse Opposite:
C G A T A C T G A C T G A C T G A G T C A C G T A G T C C G A T A G T C C A G T A T C G C A T G T A C G T A G C C T G A T C A G
p-value:1e-15
log p-value:-3.628e+01
Information Content per bp:1.672
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif69.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.4 +/- 28.6bp
Average Position of motif in Background49.4 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YTGCMSAGAGAGMMCA
-TGCCCAGNHW-----
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YTGCMSAGAGAGMMCA
-NNNACCGAGAGTNNN
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:YTGCMSAGAGAGMMCA
TTTCCTAGAAAGCA--
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:YTGCMSAGAGAGMMCA
----CCAGACAG----
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:YTGCMSAGAGAGMMCA
--------TRAGGTCA
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-YTGCMSAGAGAGMMCA
CAAATCCAGACATCACA
 A C G T A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:YTGCMSAGAGAGMMCA
-TTGACCGAGAATTCC
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:YTGCMSAGAGAGMMCA
----CCAGACRSVB--
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----YTGCMSAGAGAGMMCA
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:YTGCMSAGAGAGMMCA-----
----NNNNTGAGCACTGTNNG
 A G T C G A C T A C T G A T G C G T A C T A G C G C T A A C T G C G T A T A C G C G T A A C T G T G A C T G A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G