Information for 3-KYGASCTGCC (Motif 2)

A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C
Reverse Opposite:
C T A G A C T G A T G C T C G A T C A G T A C G A G C T G A T C C T A G T G A C
p-value:1e-69
log p-value:-1.603e+02
Information Content per bp:1.598
Number of Target Sequences with motif297.0
Percentage of Target Sequences with motif34.82%
Number of Background Sequences with motif5408.1
Percentage of Background Sequences with motif11.60%
Average Position of motif in Targets52.2 +/- 25.8bp
Average Position of motif in Background50.3 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-KYGASCTGCC-----
AAAGACCTGTCAATCC
 A C G T A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:KYGASCTGCC----
-----CTGCCCGCA
 A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---KYGASCTGCC---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-KYGASCTGCC------
TACGCCCCGCCACTCTG
 A C G T A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KYGASCTGCC-
-CCAACTGCCA
 A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:KYGASCTGCC---
---VGCTGWCAVB
 A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-KYGASCTGCC-----
AACGAGCTGTCAATAC
 A C G T A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-KYGASCTGCC-----
AAAGACCTGTCAATAC
 A C G T A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KYGASCTGCC----
CGACCAACTGCCATGC
 A C G T A C G T A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KYGASCTGCC
-TGACCT---
 A C T G G A T C C T A G T C G A A T G C A G T C A G C T T A C G T G A C G A T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T