Information for 17-GTTTAAATGC (Motif 38)

A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.237e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 32.1bp
Average Position of motif in Background55.6 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTTTAAATGC
ATTTGAATT-
 A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GTTTAAATGC
--TTAAGTGC
 A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTTTAAATGC-
-TTTAATTGCN
 A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTTTAAATGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTTTAAATGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTTTAAATGC-
-GCTAATTGCT
 A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

Hmx3/MA0898.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTTAAATGC----
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTTAAATGC----
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTTAAATGC
TTTTTATTGC
 A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTTAAATGC----
ATTCNTTAATTGCTTGT
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T