Information for 16-GTTACTAAGA (Motif 37)

A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.237e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.7 +/- 5.0bp
Average Position of motif in Background29.5 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTTACTAAGA
CTGTTGCTAGGS
 A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTTACTAAGA--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.70
Offset:-7
Orientation:reverse strand
Alignment:-------GTTACTAAGA------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTTACTAAGA--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTACTAAGA----
KGTTGCTAGGMAACA
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTACTAAGA
GTTAACTAGN-
 A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTACTAAGA--
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTACTAAGA-
-TTCCKNAGAA
 A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T
A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GTTACTAAGA------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTACTAAGA---
-TTTCTNAGAAAN
 A C T G A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T