Information for 10-GCGCTTTCTT (Motif 25)

A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T
Reverse Opposite:
G T C A C G T A A C T G C G T A G T C A C G T A A C T G A T G C T C A G A T G C
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.849
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif44.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets62.9 +/- 20.3bp
Average Position of motif in Background46.7 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTTTCTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCGCTTTCTT--
--YCTTTGTTCC
 A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGCTTTCTT
---CTTTGT-
 A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCGCTTTCTT--
--CCWTTGTYYB
 A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCTTTCTT
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCGCTTTCTT--
--CCTTTGTTTT
 A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTTTCTT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGCTTTCTT
AGGVNCCTTTGT-
 A C G T A C G T A C G T A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCTTTCTT
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGCTTTCTT
--CCWTTGTY
 A T C G A G T C A T C G A G T C C G A T A C G T A C G T T G A C C G A T A C G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T