Information for 16-AAAGGGCACAGAACAG (Motif 19)

C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
Reverse Opposite:
A G T C A G C T A C T G A G C T A G C T A G T C A C G T C A T G A C G T A C T G A T G C A G T C G T A C A C G T A C G T A G C T
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.803
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 16.9bp
Average Position of motif in Background34.9 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGCACAGAACAG
CANAGNNCAAAGTCCA-
 A C G T C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAAGGGCACAGAACAG
-TAGGGCAAAGGTCA-
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAGGGCACAGAACAG
AGAGTCCAAAGTCCA-
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAGGGCACAGAACAG-
AAAGGTCAAAGGTCAAC
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGGGCACAGAACAG
AAAGATCAAAGG----
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAGGGCACAGAACAG
GTAGGGCAAAGGTCA-
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAGGGCACAGAACAG
-GAGGTCAAAGGTCA-
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAGGGCACAGAACAG
-TGGGGCAAAGGTCA-
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGGGCACAGAACAG
-GAGGTCAAAGGTCA-
 C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAGGGCACAGAACAG-
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T C T G A C G T A C G T A A C T G C T A G A T C G A G T C C G T A G T A C G T C A A C T G T C G A C T G A A G T C C T G A C T A G A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A