Information for 13-GAGVAGGKGGCATAAT (Motif 14)

T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
Reverse Opposite:
T G C A C G A T G C A T C T G A C G A T A T C G A G T C A G T C G T A C A G T C A G T C C G A T A G T C A G T C A G C T A T G C
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.669
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.5 +/- 27.0bp
Average Position of motif in Background48.8 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGVAGGKGGCATAAT
--GGAGGGGGAA----
 T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGVAGGKGGCATAAT
SDGCAGGTGCNS----
 T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGVAGGKGGCATAAT
NNTGTAGGTAGCANNT-
 A C G T T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGVAGGKGGCATAAT-
NNNAAGGGGGCGGGNNN
 T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGVAGGKGGCATAAT-
GGCGAGGGGTCAAGGGC
 T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGVAGGKGGCATAAT
----AGGTGTCA----
 T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGVAGGKGGCATAAT
CACAGCAGGGGG------
 A C G T A C G T T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGVAGGKGGCATAAT
NNNTTAGGTAGCNTNT-
 A C G T T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGVAGGKGGCATAAT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGVAGGKGGCATAAT
GGGGGCGGGGC------
 A C G T T A C G C T G A C T A G T A C G C G T A A C T G C T A G C A T G C T A G C T A G T A G C C G T A G A C T C G T A C G T A A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T