Information for 1-YTGMTSGTTTTWG (Motif 2)

A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G
Reverse Opposite:
A G T C C G T A C G T A C G T A C G T A C G T A A T G C A T G C C G T A A C T G A G T C C G T A C T A G
p-value:1e-14
log p-value:-3.341e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 17.6bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YTGMTSGTTTTWG--
AAAACATCGTTTTTAAG
 A C G T A C G T A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--YTGMTSGTTTTWG
CCTTAATNGNTTTT-
 A C G T A C G T A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YTGMTSGTTTTWG
NTAATKGTTT---
 A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-YTGMTSGTTTTWG--
NNTGTTTATTTTGGCA
 A C G T A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YTGMTSGTTTTWG---
-TTCTATTTTTAGNNN
 A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YTGMTSGTTTTWG-
--GCTATTTATAGC
 A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G A C G T
A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--YTGMTSGTTTTWG
GAATGTTTGTTT---
 A C G T A C G T A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YTGMTSGTTTTWG-
--GCTATTTTTAGC
 A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YTGMTSGTTTTWG-
--TCTATTTATAGN
 A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G A C G T
A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

DUX4/MA0468.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:YTGMTSGTTTTWG
-TGATTAAATTA-
 A G T C A C G T A C T G G T A C A C G T A T C G A T C G A C G T A C G T A C G T A C G T C G A T C T A G
A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T