Information for 12-GCGCTGGGGTAAT (Motif 19)

A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T
Reverse Opposite:
C T G A A C G T A C G T C G T A A T G C A T G C A G T C A G T C C G T A A C T G A G T C C T A G A G T C
p-value:1e-4
log p-value:-9.932e+00
Information Content per bp:1.919
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 24.8bp
Average Position of motif in Background62.3 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCGCTGGGGTAAT
---ATGGGGTGAT
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTAAT
---GTGGGGTGAT
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T
A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

PH0103.1_Meox1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTAAT------
---CTGAGGTAATTACCNC
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTAAT
---ATGGGGTGAT
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Hoxd3/MA0912.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCGCTGGGGTAAT------
---TTGAGTTAATTAACCT
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCGCTGGGGTAAT------
---TTGAGTTAATTAACCT
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0174.1_Vax1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTAAT------
---CTNNGNTAATTAACNT
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTAAT--
---GTGGCGTGACNG
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PH0021.1_Dlx2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTAAT------
---CTGANNTAATTATNNN
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGCTGGGGTAAT
--GCTGTGGTTT-
 A C T G G A T C C T A G A G T C A C G T A C T G A C T G A T C G A T C G A C G T G T C A G T C A A G C T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T