Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-134 | -3.095e+02 | 0.0000 | 164.0 | 19.88% | 637.2 | 1.33% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-44 | -1.026e+02 | 0.0000 | 223.0 | 27.03% | 4676.9 | 9.75% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-40 | -9.416e+01 | 0.0000 | 382.0 | 46.30% | 11812.1 | 24.62% | motif file (matrix) |
svg |
4 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-17 | -3.918e+01 | 0.0000 | 183.0 | 22.18% | 5588.5 | 11.65% | motif file (matrix) |
svg |
5 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-16 | -3.689e+01 | 0.0000 | 79.0 | 9.58% | 1580.8 | 3.29% | motif file (matrix) |
svg |
6 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-12 | -2.987e+01 | 0.0000 | 161.0 | 19.52% | 5169.4 | 10.77% | motif file (matrix) |
svg |
7 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-10 | -2.462e+01 | 0.0000 | 55.0 | 6.67% | 1140.7 | 2.38% | motif file (matrix) |
svg |
8 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-10 | -2.365e+01 | 0.0000 | 51.0 | 6.18% | 1035.9 | 2.16% | motif file (matrix) |
svg |
9 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-10 | -2.364e+01 | 0.0000 | 87.0 | 10.55% | 2371.9 | 4.94% | motif file (matrix) |
svg |
10 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-10 | -2.347e+01 | 0.0000 | 63.0 | 7.64% | 1460.8 | 3.04% | motif file (matrix) |
svg |
11 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-9 | -2.226e+01 | 0.0000 | 62.0 | 7.52% | 1469.5 | 3.06% | motif file (matrix) |
svg |
12 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-9 | -2.197e+01 | 0.0000 | 55.0 | 6.67% | 1227.2 | 2.56% | motif file (matrix) |
svg |
13 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-8 | -1.976e+01 | 0.0000 | 37.0 | 4.48% | 688.9 | 1.44% | motif file (matrix) |
svg |
14 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-8 | -1.960e+01 | 0.0000 | 23.0 | 2.79% | 290.9 | 0.61% | motif file (matrix) |
svg |
15 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-8 | -1.922e+01 | 0.0000 | 31.0 | 3.76% | 517.8 | 1.08% | motif file (matrix) |
svg |
16 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.874e+01 | 0.0000 | 64.0 | 7.76% | 1692.9 | 3.53% | motif file (matrix) |
svg |
17 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-7 | -1.719e+01 | 0.0000 | 62.0 | 7.52% | 1686.8 | 3.52% | motif file (matrix) |
svg |
18 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-7 | -1.672e+01 | 0.0000 | 54.0 | 6.55% | 1395.1 | 2.91% | motif file (matrix) |
svg |
19 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-6 | -1.523e+01 | 0.0000 | 75.0 | 9.09% | 2331.0 | 4.86% | motif file (matrix) |
svg |
20 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-6 | -1.435e+01 | 0.0000 | 53.0 | 6.42% | 1467.9 | 3.06% | motif file (matrix) |
svg |
21 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.347e+01 | 0.0000 | 25.0 | 3.03% | 475.3 | 0.99% | motif file (matrix) |
svg |
22 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.307e+01 | 0.0000 | 70.0 | 8.48% | 2252.8 | 4.70% | motif file (matrix) |
svg |
23 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-5 | -1.279e+01 | 0.0000 | 73.0 | 8.85% | 2403.9 | 5.01% | motif file (matrix) |
svg |
24 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-5 | -1.236e+01 | 0.0001 | 61.0 | 7.39% | 1910.7 | 3.98% | motif file (matrix) |
svg |
25 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-5 | -1.236e+01 | 0.0001 | 82.0 | 9.94% | 2837.7 | 5.91% | motif file (matrix) |
svg |
26 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.182e+01 | 0.0001 | 32.0 | 3.88% | 771.1 | 1.61% | motif file (matrix) |
svg |
27 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-5 | -1.153e+01 | 0.0001 | 16.0 | 1.94% | 248.2 | 0.52% | motif file (matrix) |
svg |
28 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-4 | -1.129e+01 | 0.0002 | 8.0 | 0.97% | 60.3 | 0.13% | motif file (matrix) |
svg |
29 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.097e+01 | 0.0002 | 50.0 | 6.06% | 1528.3 | 3.19% | motif file (matrix) |
svg |
30 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -1.004e+01 | 0.0005 | 66.0 | 8.00% | 2293.1 | 4.78% | motif file (matrix) |
svg |
31 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-4 | -1.003e+01 | 0.0005 | 38.0 | 4.61% | 1086.0 | 2.26% | motif file (matrix) |
svg |
32 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-4 | -9.722e+00 | 0.0007 | 16.0 | 1.94% | 290.0 | 0.60% | motif file (matrix) |
svg |
33 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-4 | -9.410e+00 | 0.0009 | 21.0 | 2.55% | 464.2 | 0.97% | motif file (matrix) |
svg |
34 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -9.209e+00 | 0.0011 | 222.0 | 26.91% | 10268.7 | 21.40% | motif file (matrix) |
svg |
35 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-3 | -9.177e+00 | 0.0011 | 21.0 | 2.55% | 472.5 | 0.98% | motif file (matrix) |
svg |
36 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-3 | -9.127e+00 | 0.0011 | 36.0 | 4.36% | 1052.9 | 2.19% | motif file (matrix) |
svg |
37 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -9.122e+00 | 0.0011 | 8.0 | 0.97% | 82.3 | 0.17% | motif file (matrix) |
svg |
38 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-3 | -8.949e+00 | 0.0012 | 45.0 | 5.45% | 1442.6 | 3.01% | motif file (matrix) |
svg |
39 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.938e+00 | 0.0012 | 57.0 | 6.91% | 1973.9 | 4.11% | motif file (matrix) |
svg |
40 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-3 | -8.924e+00 | 0.0012 | 7.0 | 0.85% | 63.9 | 0.13% | motif file (matrix) |
svg |
41 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -8.704e+00 | 0.0015 | 117.0 | 14.18% | 4877.6 | 10.17% | motif file (matrix) |
svg |
42 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-3 | -8.674e+00 | 0.0015 | 19.0 | 2.30% | 419.8 | 0.87% | motif file (matrix) |
svg |
43 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -8.579e+00 | 0.0016 | 70.0 | 8.48% | 2602.1 | 5.42% | motif file (matrix) |
svg |
44 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-3 | -8.443e+00 | 0.0018 | 14.0 | 1.70% | 259.0 | 0.54% | motif file (matrix) |
svg |
45 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.284e+00 | 0.0020 | 209.0 | 25.33% | 9730.1 | 20.28% | motif file (matrix) |
svg |
46 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -8.155e+00 | 0.0023 | 64.0 | 7.76% | 2360.8 | 4.92% | motif file (matrix) |
svg |
47 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-3 | -8.026e+00 | 0.0025 | 38.0 | 4.61% | 1201.5 | 2.50% | motif file (matrix) |
svg |
48 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.865e+00 | 0.0029 | 43.0 | 5.21% | 1429.6 | 2.98% | motif file (matrix) |
svg |
49 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -7.701e+00 | 0.0034 | 49.0 | 5.94% | 1709.0 | 3.56% | motif file (matrix) |
svg |
50 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -7.545e+00 | 0.0038 | 47.0 | 5.70% | 1631.1 | 3.40% | motif file (matrix) |
svg |
51 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.542e+00 | 0.0038 | 42.0 | 5.09% | 1408.8 | 2.94% | motif file (matrix) |
svg |
52 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.442e+00 | 0.0041 | 46.0 | 5.58% | 1594.2 | 3.32% | motif file (matrix) |
svg |
53 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.395e+00 | 0.0042 | 18.0 | 2.18% | 429.4 | 0.89% | motif file (matrix) |
svg |
54 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.340e+00 | 0.0044 | 33.0 | 4.00% | 1031.7 | 2.15% | motif file (matrix) |
svg |
55 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.205e+00 | 0.0049 | 112.0 | 13.58% | 4822.0 | 10.05% | motif file (matrix) |
svg |
56 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -7.099e+00 | 0.0054 | 102.0 | 12.36% | 4330.2 | 9.02% | motif file (matrix) |
svg |
57 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -7.059e+00 | 0.0055 | 52.0 | 6.30% | 1900.1 | 3.96% | motif file (matrix) |
svg |
58 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.042e+00 | 0.0055 | 56.0 | 6.79% | 2088.9 | 4.35% | motif file (matrix) |
svg |
59 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-3 | -6.932e+00 | 0.0060 | 33.0 | 4.00% | 1057.9 | 2.20% | motif file (matrix) |
svg |
60 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -6.907e+00 | 0.0061 | 46.0 | 5.58% | 1637.6 | 3.41% | motif file (matrix) |
svg |
61 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -6.776e+00 | 0.0068 | 54.0 | 6.55% | 2019.4 | 4.21% | motif file (matrix) |
svg |
62 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -6.649e+00 | 0.0076 | 62.0 | 7.52% | 2411.1 | 5.02% | motif file (matrix) |
svg |
63 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.519e+00 | 0.0085 | 29.0 | 3.52% | 912.2 | 1.90% | motif file (matrix) |
svg |
64 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -6.258e+00 | 0.0109 | 94.0 | 11.39% | 4040.0 | 8.42% | motif file (matrix) |
svg |
65 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -6.052e+00 | 0.0132 | 24.0 | 2.91% | 729.3 | 1.52% | motif file (matrix) |
svg |
66 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -5.991e+00 | 0.0138 | 32.0 | 3.88% | 1078.8 | 2.25% | motif file (matrix) |
svg |
67 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.850e+00 | 0.0156 | 39.0 | 4.73% | 1405.1 | 2.93% | motif file (matrix) |
svg |
68 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.754e+00 | 0.0170 | 17.0 | 2.06% | 460.8 | 0.96% | motif file (matrix) |
svg |
69 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.529e+00 | 0.0210 | 26.0 | 3.15% | 847.6 | 1.77% | motif file (matrix) |
svg |
70 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.371e+00 | 0.0242 | 21.0 | 2.55% | 643.1 | 1.34% | motif file (matrix) |
svg |
71 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.281e+00 | 0.0261 | 27.0 | 3.27% | 908.7 | 1.89% | motif file (matrix) |
svg |
72 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-2 | -5.269e+00 | 0.0261 | 13.0 | 1.58% | 327.7 | 0.68% | motif file (matrix) |
svg |
73 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.151e+00 | 0.0289 | 19.0 | 2.30% | 572.7 | 1.19% | motif file (matrix) |
svg |
74 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.076e+00 | 0.0307 | 70.0 | 8.48% | 2991.5 | 6.23% | motif file (matrix) |
svg |
75 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -4.991e+00 | 0.0330 | 87.0 | 10.55% | 3869.6 | 8.06% | motif file (matrix) |
svg |
76 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -4.988e+00 | 0.0330 | 40.0 | 4.85% | 1530.6 | 3.19% | motif file (matrix) |
svg |
77 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -4.901e+00 | 0.0352 | 30.0 | 3.64% | 1072.1 | 2.23% | motif file (matrix) |
svg |
78 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.878e+00 | 0.0355 | 6.0 | 0.73% | 98.2 | 0.20% | motif file (matrix) |
svg |