Information for 6-TAACAATGGA (Motif 7)

G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C G T C A A G C T A C G T A T C G A C G T A C G T C G T A
p-value:1e-12
log p-value:-2.857e+01
Information Content per bp:1.838
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif85.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets56.1 +/- 27.4bp
Average Position of motif in Background46.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TAACAATGGA
VRAACAATGG-
 A C G T G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TAACAATGGA
GAACAATGG-
 G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TAACAATGGA
GAACAATGGN
 G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---TAACAATGGA---
AATGAACAATGGAATT
 A C G T A C G T A C G T G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TAACAATGGA
-AACAAAGG-
 G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----TAACAATGGA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TAACAATGGA
-RACAAWGG-
 G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TAACAATGGA
RAACAATGGN
 G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TAACAATGGA
NAACAAT---
 G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TAACAATGGA
RNAACAATGG-
 A C G T G C A T G T C A G T C A T A G C G T C A C T G A A C G T C T A G C T A G C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T