Information for 4-AGGTCTGGGCTCACTK (Motif 6)

G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
Reverse Opposite:
G T A C C T G A A T C G G A C T T A C G C G T A T A C G A G T C A G T C A T G C C G T A A T C G T G C A T G A C A G T C C G A T
p-value:1e-12
log p-value:-2.875e+01
Information Content per bp:1.685
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif48.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets41.6 +/- 23.2bp
Average Position of motif in Background44.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGTCTGGGCTCACTK
-WDNCTGGGCA-----
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGGTCTGGGCTCACTK
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGTCTGGGCTCACTK
-GGTCTGGCAT-----
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGTCTGGGCTCACTK-
--GTCATGCHTGRCTGS
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGTCTGGGCTCACTK
-TGTCAGGGGGCG---
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGTCTGGGCTCACTK--
-NTNNNGGGGTCANGNNN
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGTCTGGGCTCACTK--
-CTCCAGGGGTCAATTGA
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G A C G T A C G T
A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGGTCTGGGCTCACTK
----GTGGCGTGACNG
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGGTCTGGGCTCACTK
GGGGCTYGKCTGGGA------
 A C G T A C G T A C G T A C G T A C G T G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGTCTGGGCTCACTK
CTGTCTGG--------
 G C T A A C T G A C T G A C G T A T G C C G A T A T C G A C T G A C T G A T G C C G A T A T G C C G T A A T G C A G C T C A T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T