Information for 3-GCAAACAAACCTG (Motif 5)

A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
Reverse Opposite:
G T A C C G T A T A C G A T C G A C G T A C G T A C G T A T C G C A G T A C G T A C G T A T C G T A G C
p-value:1e-14
log p-value:-3.262e+01
Information Content per bp:1.781
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.9 +/- 26.1bp
Average Position of motif in Background51.3 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCAAACAAACCTG
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GCAAACAAACCTG
----CCTCACCTG
 A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAACCTG
CAAAAGTAAACAAAG---
 A C G T A C G T A C G T A C G T A C G T A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAACCTG
AAAAAGTAAACAAACAC-
 A C G T A C G T A C G T A C G T A C G T A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAACCTG
AAAAAGTAAACAAACAC-
 A C G T A C G T A C G T A C G T A C G T A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GCAAACAAACCTG--
------NCACCTGTN
 A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCAAACAAACCTG--
-----CGCACCTGCT
 A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCAAACAAACCTG-
----RYHYACCTGB
 A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCAAACAAACCTG
AAGTAAACAAA----
 A C G T A C G T A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCAAACAAACCTG
AAAATGTAAACAAACAG-
 A C G T A C G T A C G T A C G T A C G T A T C G T A G C G T C A C G T A G T C A A T G C G T C A G T C A C G T A A T G C A G T C C G A T A C T G
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G A C G T