Information for 7-GCCAAGCTGGTCTGTG (Motif 24)

A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C C T G A C T A G T C G A A G T C A G T C C T G A A C T G A T G C A G C T A C G T A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 13.3bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCTGGTCTGTG
CGTGCCAAG----------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGCTGGTCTGTG
TGCCAA-----------
 A C G T A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGCTGGTCTGTG
NGTCACGCTTGGCTGC-
 A C G T A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCAAGCTGGTCTGTG
GTCATGCHTGRCTGS-
 A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCAAGCTGGTCTGTG-
--GGGGCTYGKCTGGGA
 A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G A C G T
A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCCAAGCTGGTCTGTG-------
-------TGGACTTTGNNCTNTG
 A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCCAAGCTGGTCTGTG
--CCAGCTGTTN----
 A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCCAAGCTGGTCTGTG
------CTGACCTTTG
 A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCCAAGCTGGTCTGTG------
-------TGGACTTTGNNCTCN
 A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCTGGTCTGTG
GGTGCCAAGT---------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C T G A A T C G A G T C A G C T A C T G A C T G A G C T A G T C A G C T A C T G A C G T A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T