Information for 12-GGCVBGCAGAGGG (Motif 20)

A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G
Reverse Opposite:
G A T C A G T C A G T C C G A T A G T C A C G T A C T G A G T C T A G C A C T G A C T G A G T C A T G C
p-value:1e-9
log p-value:-2.102e+01
Information Content per bp:1.812
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.1 +/- 29.4bp
Average Position of motif in Background47.5 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCVBGCAGAGGG---
NNNANTGCAGTGCNNTT
 A C G T A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCVBGCAGAGGG--------
-GCCASCAGGGGGCGCYVNNG
 A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCVBGCAGAGGG-----
TGGCCACCAGGGGGCGCTA
 A C G T A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCVBGCAGAGGG-
GCCGCGCAGTGCGT
 A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCVBGCAGAGGG
--CCTGCTGAGH-
 A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ELK4/MA0076.2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCVBGCAGAGGG
-NCCGGAAGTGG-
 A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G
A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCVBGCAGAGGG------
TGGCCACCAGGTGGCACTNT
 A C G T A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCVBGCAGAGGG
TBGCACGCAA----
 A C G T A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCVBGCAGAGGG-
TNTCCTGCTGTGNNG
 A C G T A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCVBGCAGAGGG-
TCNCCTGCTGNGNNN
 A C G T A T C G A C T G A G T C T A G C A C T G A C T G G T A C C G T A A C T G C G T A A C T G A C T G C T A G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G