Information for 7-AGGCCAGTGA (Motif 15)

C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A
Reverse Opposite:
A C G T T A G C G T C A A T G C C A G T A C T G T C A G G A T C G T A C C G A T
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.822
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif221.2
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets58.1 +/- 27.0bp
Average Position of motif in Background51.7 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAGTGA
AAGGCAAGTGT
 A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCAGTGA---
NAGGTCANTGACCT
 A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGGCCAGTGA---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGCCAGTGA
ACTAGCCAATCA
 A C G T A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCAGTGA
CTAGGCCT----
 A C G T A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGCCAGTGA-
-AGCCAATCGG
 C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGCCAGTGA
CAAAGGTCAG---
 A C G T A C G T A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCAGTGA
CNAGGCCT----
 A C G T A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGCCAGTGA
TRAGGTCA----
 A C G T A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCAGTGA---
CAGGCCNNGGCCNN
 A C G T C G T A C A T G C T A G A G T C G T A C G T C A A T C G A C G T A T C G G T C A A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C