Information for 7-WTGGCTKGMTTCY (Motif 13)

C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C G T A A C G T A G T C G T A C C G T A A C T G A G T C A G T C C G T A C G A T
p-value:1e-10
log p-value:-2.443e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 22.1bp
Average Position of motif in Background50.9 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WTGGCTKGMTTCY-
CTGGCAGNCTGCCA
 C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WTGGCTKGMTTCY-
TTGGCATGGTGCCA
 C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----WTGGCTKGMTTCY
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WTGGCTKGMTTCY
TTGGCA-------
 C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WTGGCTKGMTTCY
TWGTCTGV-----
 C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-WTGGCTKGMTTCY
NTTGGCANN-----
 A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WTGGCTKGMTTCY--
CTTGGCANNNTGCCAA
 A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WTGGCTKGMTTCY
--NGCTN------
 C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WTGGCTKGMTTCY
-GGTCTGGCAT--
 C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:WTGGCTKGMTTCY
--GGCGCGCT---
 C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G G T C A A C G T A C G T A G T C A G C T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T