Information for 11-CAATGTGTCATTT (Motif 9)

G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T C T A G C G T A A G T C C G T A G T A C G T C A A G C T A C G T A C T G
p-value:1e-12
log p-value:-2.991e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 25.3bp
Average Position of motif in Background53.6 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAATGTGTCATTT--
NCNTTTGTTATTTNN
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAATGTGTCATTT--
TNNNNGGTGTCATNTNT
 A C G T A C G T G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAATGTGTCATTT
--AGGTGTCA---
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAATGTGTCATTT
--AGGTGTGA---
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAATGTGTCATTT
--AGGTGTGAAM-
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAATGTGTCATTT
--AGGTGTGA---
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAATGTGTCATTT
-AAGGTGTGAAA-
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAATGTGTCATTT
-AAGGTGTKAA--
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAATGTGTCATTT
--ATGAGTCAT--
 G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAATGTGTCATTT
GAACADWATGTTCTT-
 A C G T A C G T A C G T G T A C C G T A C T G A A C G T A C T G C G A T A C T G A C G T A G T C G T C A A C G T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T