Information for 10-CTKTAAGCCWGCC (Motif 8)

A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C T G A C T G A T G C A G C T A C G T G T C A G T A C C G T A A C T G
p-value:1e-13
log p-value:-3.066e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.7 +/- 17.2bp
Average Position of motif in Background74.5 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTKTAAGCCWGCC-
CTGGCAGNCTGCCA
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTKTAAGCCWGCC
---TAATCCCN--
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTKTAAGCCWGCC
--TTAATCCC---
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTKTAAGCCWGCC
--ATAATCCC---
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTKTAAGCCWGCC
GCTGTTACCCT---
 A C G T A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTKTAAGCCWGCC--
-NNTAATCCNGNCNN
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTKTAAGCCWGCC
-----AGCGCGCC
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTKTAAGCCWGCC
-CTTAATCCC---
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTKTAAGCCWGCC
--TTAATCCT---
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTKTAAGCCWGCC----
-ACTATGCCAACCTACC
 A G T C A C G T A C T G A C G T C G T A C T G A A T C G A G T C A G T C C G A T A C T G G T A C A G T C A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C