Information for 8-AAAGGSTTTCATT (Motif 6)

C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A C G A T A C T G C G T A C T G A C G T A T A G C G T A C G T A C C G A T A C G T A C G T
p-value:1e-13
log p-value:-3.179e+01
Information Content per bp:1.781
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 27.8bp
Average Position of motif in Background28.4 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six3/MA0631.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAGGSTTTCATT---
GATAGGGTATCACTAAT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAGGSTTTCATT---
GATAGGGTATCACTAAT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGGSTTTCATT---
AATAGGGTATCATATAT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAAGGSTTTCATT
---TGGTTTCAGT
 C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGSTTTCATT---
TNNNNGGTGTCATNTNT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGGSTTTCATT---
AATAGGGTATCAATATT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAGGSTTTCATT---
GATGGGGTATCATTTTT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAGGSTTTCATT---
AATAGGGTATCAATTAT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGGSTTTCATT---
AATGGGGTATCACGTTT
 A C G T C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AAAGGSTTTCATT-------
---TGTTCCCATTGTGTACT
 C G T A G T C A G C T A A C T G A C T G A T C G A C G T A G C T G A C T A G T C C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T