Information for 9-RRATGKTYTYTCC (Motif 17)

C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C T G A C G T A C T G A C G T A G T A C A G T C C G T A A C G T A G C T A G T C
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.842
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.4 +/- 21.3bp
Average Position of motif in Background46.5 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RRATGKTYTYTCC--
TNNNATGATTTCNNCNN
 A C G T A C G T C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:RRATGKTYTYTCC---
------ATTTTCCATT
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:RRATGKTYTYTCC
GAATGTTTGTTT-
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.62
Offset:7
Orientation:forward strand
Alignment:RRATGKTYTYTCC-
-------TTTTCCA
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:RRATGKTYTYTCC---
------ATTTTCCATT
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RRATGKTYTYTCC
---GGGGATTTCC
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:RRATGKTYTYTCC---
------ATTTTCCATT
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RRATGKTYTYTCC
---GGGAATTTCC
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RRATGKTYTYTCC
---GGGGATTTCC
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:RRATGKTYTYTCC----
---TTTTTTTTCNNGTN
 C T A G C T G A T G C A A C G T A C T G A C T G A C G T A G C T A C G T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A