Information for 5-GCCGAGAACA (Motif 13)

A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A
Reverse Opposite:
C A G T T C A G A C G T A C G T A T G C G C A T A G T C C T A G A C T G T A G C
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.666
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif936.0
Percentage of Background Sequences with motif1.94%
Average Position of motif in Targets44.4 +/- 28.0bp
Average Position of motif in Background50.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCCGAGAACA-
-CCAGGAACAG
 A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGAACA--
GNNACCGAGAATNNN
 A C G T A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCGAGAACA--
TTGACCGAGAATTCC
 A C G T A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGAACA
CWGGCGGGAA--
 A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCGAGAACA-
TGGCGGGAAAHB
 A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGAACA--
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGAACA---
NGNTCTAGAACCNGV
 A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCGAGAACA
ATTTCCAAGAA--
 A C G T A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGAACA
CTTCCNGGAA--
 A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGAACA----
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A T C G T G A C G A T C T C A G C G T A A T C G T G C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G