Information for 7-GAAAGTGCACACT (Motif 12)

C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T
Reverse Opposite:
C T G A A C T G A G C T A T C G C A G T A C T G A G T C G T C A G T A C A C G T C G A T A G C T A G T C
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.803
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.0 +/- 24.8bp
Average Position of motif in Background57.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0042.1_Mafk_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGCACACT-
TAAAAATGCTGACTT
 A C G T C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAGTGCACACT--
CGAACAGTGCTCACTAT
 A C G T A C G T C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGTGCACACT--
NNGTATGTGCACATNNN
 A C G T A C G T C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAAGTGCACACT
-AAAATGCTGACT
 C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAAGTGCACACT----
AAATTTGCTGACTTAGA
 C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGCACACT---
TACATGTGCACATAAAA
 A C G T C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAAGTGCACACT----
-NNTTTGCACACGGCCC
 C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GAAAGTGCACACT
GAAAGTGAAAGT-------
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAAAGTGCACACT---
-AAANTGCTGACTNAG
 C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAAAGTGCACACT
----ATGCCCACC
 C T A G C T G A C G T A C G T A A C T G A C G T C T A G A G T C G C T A A T G C C T G A A G T C A G C T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C